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Modules

From Montana Tech High Performance Computing

The Modules package provides for the dynamic modification of a user's environment without modifying the .bashrc or .profile files. The user simply loads the needed packages and the module command aloters or sets shell environment variables like the PATH variable.

Example Commands

module avail ->lists available modules on the system
module listing ->lists the modules a user currently has loaded
module load namd ->load the NAMD package
module show namd ->display information aboute the NAMD module
man module ->complete documentation on module

Current Modules on HPC

blast+
cuda/8.0
GATK
gcc/5.4.0 gcc/6.3.0
hmmer
java
lammps/20161117
matlab
mpich/gnu/3.2
mpich2/gnu/1.5
mvapich2/gnu/2.2
mothur/1.39.5 mothur/1.39.5_mpi
openmpi/gnu/2.0
namd
python/2.6.5 python/3.6.4
R/3.3.3  : R/3.4.3
vmd

Admin Note

Module files are located in /opt/scyld/modulefiles